STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI62791.1Hypothetical protein. (503 aa)    
Predicted Functional Partners:
SDI62754.1
Uncharacterized membrane protein.
       0.528
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.519
SDI69930.1
Hypothetical protein.
  
     0.495
SDJ53019.1
Glycosyltransferase, GT2 family.
  
     0.494
SDK06585.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.469
SDI71600.1
Tetratricopeptide repeat-containing protein.
  
     0.463
SDI95006.1
Hypothetical protein; Belongs to the MtfA family.
  
     0.438
SDI76540.1
Hypothetical protein.
  
     0.404
SDI80450.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.