STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI63531.1Outer membrane protein beta-barrel domain-containing protein. (190 aa)    
Predicted Functional Partners:
SDJ43942.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.620
SDI61753.1
Putative MetA-pathway of phenol degradation.
  
     0.495
SDI55544.1
Hypothetical protein.
  
 
 0.462
SDJ26788.1
BlaR1 peptidase M56.
  
     0.438
SDI63494.1
Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
       0.433
SDI61784.1
PAP2 superfamily protein.
  
    0.431
SDI50632.1
Surface antigen.
  
 
   0.413
SDJ66601.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.