STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI65442.1Predicted dehydrogenase. (354 aa)    
Predicted Functional Partners:
SDI65363.1
alpha-L-rhamnosidase.
 
    0.896
SDI64303.1
Sugar phosphate isomerase/epimerase.
 
 
  0.883
SDI65404.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.880
SDI65491.1
Right handed beta helix region.
 
     0.880
SDI65292.1
Protein of unknown function.
 
    0.860
SDI65122.1
Hypothetical protein.
 
    0.794
SDI64256.1
Glycosyl hydrolase family 20, domain 2.
 
     0.793
SDI65204.1
alpha-L-rhamnosidase.
 
     0.792
SDI64620.1
BNR repeat-like domain-containing protein.
 
     0.789
SDI64428.1
Trehalase.
 
     0.786
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.