STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI65971.1L-rhamnose mutarotase. (114 aa)    
Predicted Functional Partners:
SDJ43258.1
L-fuconolactonase.
 
  
 0.827
SDJ43304.1
L-fucose dehydrogenase.
 
    0.801
fucP
MFS transporter, FHS family, L-fucose permease.
  
    0.728
SDI66008.1
F5/8 type C domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
       0.625
SDJ30103.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.625
SDI66119.1
alpha-L-fucosidase.
 
    0.605
SDJ33206.1
Sugar (pentulose or hexulose) kinase.
  
  
 0.585
SDJ32847.1
Xylulokinase.
  
  
 0.577
SDI66042.1
alpha-L-fucosidase 2.
       0.570
SDI66154.1
alpha-L-fucosidase.
 
    0.563
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.