STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI66306.1Gliding motility-associated C-terminal domain-containing protein. (481 aa)    
Predicted Functional Partners:
SDI66347.1
Type IX secretion system membrane protein, PorP/SprF family.
 
  
 0.968
remG
Hypothetical protein.
 
     0.894
SDI66386.1
Gliding motility-associated C-terminal domain-containing protein.
 
  
  0.886
SDI66427.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.872
SDI66226.1
Hypothetical protein.
 
     0.856
SDI96465.1
Protein of unknown function.
  
     0.744
SDJ02759.1
Predicted lipoprotein.
  
     0.738
SDI96390.1
Peptidogalycan biosysnthesis/recognition.
  
     0.704
SDI58279.1
Hypothetical protein.
  
     0.682
SDJ45532.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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