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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI70237.1Threonine/homoserine/homoserine lactone efflux protein. (226 aa)    
Predicted Functional Partners:
rnr
RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
       0.728
SDI70278.1
Putative auto-transporter adhesin, head GIN domain.
       0.725
hemD
uroporphyrinogen-III synthase.
  
     0.656
SDJ57439.1
SprT-like family protein.
  
     0.652
SDJ04279.1
Hypothetical protein.
  
     0.640
SDI75908.1
Hypothetical protein.
  
     0.615
gldM
Protein involved in gliding motility GldM.
  
     0.609
SDI96196.1
Protein involved in gliding motility GldN.
  
     0.601
SDJ01329.1
Putative porin.
  
     0.595
SDI52633.1
4-hydroxybenzoate polyprenyltransferase.
  
     0.582
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.