STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI71119.1Protein involved in gliding motility SprE. (873 aa)    
Predicted Functional Partners:
sprA
Protein involved in gliding motility SprA.
  
  
 0.873
gldM
Protein involved in gliding motility GldM.
  
   
 0.871
gldL
Protein involved in gliding motility GldL.
  
   
 0.867
SDI71154.1
Protein CcmA, bactofilin family.
 
     0.855
porT
Probable protein-translocating porin PorT.
  
   
 0.842
SDI71185.1
Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter.
 
     0.837
SDI96196.1
Protein involved in gliding motility GldN.
  
   
 0.834
SDJ58147.1
Protein involved in gliding motility GldJ.
  
   
 0.820
gldB
Protein involved in gliding motility GldB.
  
   
 0.812
SDI96085.1
Protein involved in gliding motility GldK.
  
   
 0.792
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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