STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI71891.1Cytochrome c. (152 aa)    
Predicted Functional Partners:
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SDI71924.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
  0.888
SDJ00907.1
Rieske Fe-S protein.
   
  0.669
SDJ70370.1
Cytochrome b6-f complex iron-sulfur subunit.
   
  0.669
actC
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 
  0.639
SDJ47195.1
Hypothetical protein.
   
 0.602
ctaC
Cytochrome c oxidase subunit 2.
   
 0.601
norB
Nitric oxide reductase, NorB subunit apoprotein; Belongs to the heme-copper respiratory oxidase family.
   
 0.601
ctaE
Cytochrome c oxidase subunit 3.
   
  0.600
SDI88498.1
Cytochrome c oxidase subunit 3.
   
  0.600
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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