STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI72130.1Helix-turn-helix domain-containing protein. (95 aa)    
Predicted Functional Partners:
SDK02805.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.771
SDI72091.1
DNA (cytosine-5)-methyltransferase 1.
    
  0.665
SDI72060.1
DNA (cytosine-5)-methyltransferase 1.
    
  0.574
SDJ61737.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.522
SDJ61773.1
Gliding motility-associated C-terminal domain-containing protein.
  
    0.465
SDI84937.1
Protein of unknown function.
  
 
  0.455
SDI71958.1
T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.
       0.444
SDI71998.1
Hypothetical protein.
       0.443
SDI72030.1
5-methylcytosine-specific restriction endonuclease McrBC, GTP-binding regulatory subunit McrB.
       0.433
SDI73697.1
Hypothetical protein.
  
  
  0.419
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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