STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI72294.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (382 aa)    
Predicted Functional Partners:
SDI72329.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
     0.947
SDI72360.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
     0.905
SDI72432.1
Predicted dehydrogenase.
 
     0.904
SDI72467.1
Acyl dehydratase.
 
     0.877
SDI72393.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.861
SDI64256.1
Glycosyl hydrolase family 20, domain 2.
  
     0.658
SDJ94765.1
PAS domain S-box-containing protein.
  
 
 0.593
SDI65442.1
Predicted dehydrogenase.
 
     0.549
SDJ75288.1
SusD family protein.
  
     0.539
SDI65292.1
Protein of unknown function.
 
     0.533
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.