STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI72467.1Acyl dehydratase. (147 aa)    
Predicted Functional Partners:
SDI72360.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
 
 0.933
SDI72329.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
 
 0.914
SDI72432.1
Predicted dehydrogenase.
 
     0.888
SDK02207.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.881
SDI72294.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.877
degP
Do/DeqQ family serine protease.
    
  0.851
SDI72393.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.841
SDJ31478.1
3-oxoacid CoA-transferase.
  
 
 0.785
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.776
SDI72500.1
MFS transporter, FHS family, L-fucose permease.
       0.709
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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