STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI73017.1Putative beta-lactamase-inhibitor-like, PepSY-like. (392 aa)    
Predicted Functional Partners:
SDJ09927.1
Thiamine pyrophosphokinase.
  
     0.517
SDJ70370.1
Cytochrome b6-f complex iron-sulfur subunit.
  
 
   0.514
SDI72984.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.479
SDI72949.1
Hypothetical protein.
       0.476
SDJ63305.1
Hypothetical protein.
  
     0.476
SDI73090.1
Response regulator receiver domain-containing protein.
   
   0.454
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.434
SDI66606.1
Hypothetical protein.
  
     0.418
SDJ62074.1
Hypothetical protein.
  
     0.415
SDI95147.1
Colicin import membrane protein.
  
     0.414
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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