STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI73500.12,4-dienoyl-CoA reductase. (355 aa)    
Predicted Functional Partners:
SDI50265.1
Electron transfer flavoprotein beta subunit.
  
 
 0.743
gltA
Glutamate synthase (NADH) large subunit.
    
 0.740
nfnB
Nitroreductase / dihydropteridine reductase.
  
 
  0.577
SDI73551.1
Predicted dehydrogenase.
       0.538
SDI73461.1
Regulator of sigma E protease.
       0.522
etfA
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.517
SDK02207.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.464
menE
O-succinylbenzoic acid--CoA ligase.
     
 0.404
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.