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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI73660.1Outer membrane receptor proteins, mostly Fe transport. (953 aa)    
Predicted Functional Partners:
SDI73697.1
Hypothetical protein.
 
     0.948
SDI74879.1
Endonuclease/Exonuclease/phosphatase family protein.
 
     0.816
SDJ02796.1
Hypothetical protein.
  
 
   0.472
SDI72690.1
Protein of unknown function.
  
 
   0.458
fjo13
Protein of unknown function.
  
     0.452
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
     0.434
SDI79299.1
Hypothetical protein.
  
     0.419
SDJ02963.1
Septum formation initiator.
  
     0.418
SDI50632.1
Surface antigen.
  
     0.403
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.