STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI74430.1Glyoxylase, beta-lactamase superfamily II. (286 aa)    
Predicted Functional Partners:
thiF
Adenylyltransferase and sulfurtransferase.
  
 0.741
SDJ96071.1
Adenylyltransferase and sulfurtransferase.
  
 0.741
SDI74455.1
Subtilase family protein; Belongs to the peptidase S8 family.
       0.621
SDJ47195.1
Hypothetical protein.
    
 0.594
SDI48049.1
Lipoprotein-releasing system permease protein.
   
 
 0.588
SDI74494.1
Peptidase family M1.
       0.573
SDJ12219.1
Hypothetical protein.
  
 0.544
SDJ58064.1
Regulatory protein, luxR family.
    
   0.497
SDI49493.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.496
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.494
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.