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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI74769.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
SDI65888.1
Hypothetical protein.
  
     0.616
SDI73783.1
Hypothetical protein.
  
     0.610
SDI57298.1
SusE outer membrane protein.
  
     0.588
SDI97878.1
Hypothetical protein.
  
     0.565
SDK07821.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.559
SDI61902.1
TonB-dependent Receptor Plug Domain.
  
 
   0.524
SDJ97731.1
Hypothetical protein.
  
     0.517
aspC1
Aspartate aminotransferase.
   
 
  0.509
aspC2
Aspartate aminotransferase.
   
 
  0.509
SDI74801.1
Putative endonuclease; Belongs to the UPF0102 family.
  
    0.508
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.