STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI75527.1MoxR-like ATPase. (334 aa)    
Predicted Functional Partners:
SDI75569.1
Protein of unknown function DUF58.
  
 0.940
batA
Ca-activated chloride channel family protein.
 
 
 0.909
batB
Ca-activated chloride channel family protein.
 
 
 0.887
SDI55376.1
Protein of unknown function DUF58.
 
  
 0.656
SDI75612.1
Hypothetical protein.
 
    0.655
SDI75741.1
Tetratricopeptide repeat-containing protein.
 
     0.613
batD
Oxygen tolerance.
 
     0.581
batE
SH3 domain-containing protein.
 
     0.489
SDI75483.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.411
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.