STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
batACa-activated chloride channel family protein. (333 aa)    
Predicted Functional Partners:
SDI75569.1
Protein of unknown function DUF58.
 
  
 0.942
SDI75527.1
MoxR-like ATPase.
 
 
 0.909
SDI75612.1
Hypothetical protein.
 
     0.899
SDI75741.1
Tetratricopeptide repeat-containing protein.
     0.887
SDJ43349.1
Magnesium chelatase subunit I.
  
 0.875
batD
Oxygen tolerance.
 
    0.855
batE
SH3 domain-containing protein.
 
     0.736
batB
Ca-activated chloride channel family protein.
 
   
0.731
SDJ02443.1
MoxR-like ATPase.
 
 
 0.643
SDI55376.1
Protein of unknown function DUF58.
 
  
 0.640
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.