STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI77762.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SDI77724.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.830
SDI55312.1
Hypothetical protein.
  
     0.688
SDJ07563.1
Hypothetical protein.
  
     0.654
SDI80735.1
Hypothetical protein.
  
     0.637
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.628
SDJ51545.1
Hypothetical protein.
  
     0.619
SDK07125.1
CarboxypepD_reg-like domain-containing protein.
  
     0.611
SDI88541.1
Cytochrome C oxidase subunit IV.
  
     0.604
SDJ57631.1
Outer membrane transport energization protein TonB.
  
     0.602
SDJ92366.1
Hypothetical protein.
  
     0.602
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.