STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI81081.1Small conductance mechanosensitive channel. (277 aa)    
Predicted Functional Partners:
SDI81120.1
Hypothetical protein.
     
 0.688
gcvP
Glycine dehydrogenase; Belongs to the GcvP family.
   
    0.610
SDI81164.1
Transporter, CPA2 family.
     
 0.580
SDJ30992.1
Mechanosensitive ion channel.
 
  
 0.492
SDI81043.1
Uncharacterized conserved protein.
       0.484
SDI81199.1
Quaternary ammonium compound-resistance protein SugE.
       0.451
SDJ11966.1
PAS domain S-box-containing protein.
  
  
 0.410
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.