STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI86233.1Protein of unknown function. (1092 aa)    
Predicted Functional Partners:
SDK07733.1
Membrane protein YfhO.
  
     0.744
SDI95858.1
Lipopolysaccharide-assembly.
  
     0.739
SDI89257.1
Periplasmic chaperone for outer membrane proteins Skp.
  
     0.737
SDJ05908.1
Tetratricopeptide repeat-containing protein.
  
     0.732
bamA
Beta-barrel assembly machine subunit BamA.
  
     0.723
SDI79299.1
Hypothetical protein.
  
     0.721
SDJ06232.1
Hypothetical protein.
  
     0.719
SDJ47661.1
Lipopolysaccharide export system permease protein.
  
     0.700
SDI95796.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.692
SDJ70892.1
Hypothetical protein.
  
     0.671
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.