STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI86410.1NADP-dependent aldehyde dehydrogenase. (522 aa)    
Predicted Functional Partners:
SDI86447.1
Proline racemase; Belongs to the proline racemase family.
 
 
  0.953
SDI86367.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
 
  0.918
dadA
D-amino-acid dehydrogenase.
 
 
 0.888
gltA
Glutamate synthase (NADH) large subunit.
  
 
 0.800
SDI68477.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.765
SDI86327.1
Transcriptional regulator, AraC family.
 
     0.746
maeB
Allosteric NADP-dependent malic enzyme.
  
 
 0.737
SDJ44605.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.697
SDJ31478.1
3-oxoacid CoA-transferase.
  
 0.691
SDK02207.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.687
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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