STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actCQuinol:cytochrome c oxidoreductase quinone-binding subunit 1. (467 aa)    
Predicted Functional Partners:
SDI87106.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
 
 
  0.999
actB
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 0.999
actD
Quinol:cytochrome c oxidoreductase membrane protein.
 
 
  0.999
actE
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
 
  0.999
actF
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2.
 
 
 0.999
SDJ00867.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.961
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.858
ctaC
Cytochrome c oxidase subunit 2.
     
 0.806
ctaD
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
     
 0.772
cycA
Nitrite reductase (NO-forming).
 
 
 0.677
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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