STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88096.1Alpha,alpha-trehalase. (622 aa)    
Predicted Functional Partners:
SDI88063.1
Fucose permease.
 
     0.851
SDI87673.1
Trehalose and maltose hydrolase (possible phosphorylase).
  
 0.798
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
 
    0.712
SDI88125.1
CBS domain-containing protein.
       0.701
SDI88018.1
Maltooligosyl trehalose synthase.
 
 
 0.667
SDI87981.1
Fructokinase.
  
    0.516
SDI65122.1
Hypothetical protein.
   
 0.512
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
  0.499
galM-2
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
  0.499
SDJ73379.1
2'-5' RNA ligase.
     
  0.499
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.