STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88574.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SDI88541.1
Cytochrome C oxidase subunit IV.
 
     0.903
SDI88668.1
Hypothetical protein.
 
     0.844
ypmQ
Protein SCO1/2.
 
     0.837
yozB
Putative membrane protein.
       0.814
SDI88498.1
Cytochrome c oxidase subunit 3.
 
     0.802
SDJ92366.1
Hypothetical protein.
  
     0.769
SDJ05310.1
Protein of unknown function.
  
     0.767
SDJ65615.1
Protein of unknown function.
  
     0.762
SDI70841.1
Hypothetical protein.
  
     0.758
SDI55312.1
Hypothetical protein.
  
     0.750
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.