STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88705.1Protein of unknown function. (468 aa)    
Predicted Functional Partners:
SDI81234.1
CarboxypepD_reg-like domain-containing protein.
  
     0.690
SDJ46510.1
Hypothetical protein.
  
     0.624
SDI88737.1
Outer membrane protein.
 
     0.623
SDJ39709.1
Signal transduction histidine kinase.
  
     0.596
SDI48860.1
Hypothetical protein.
  
     0.544
SDI88772.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.540
SDI91496.1
Hypothetical protein.
  
     0.526
SDI51368.1
Peptidyl-prolyl cis-trans isomerase D.
  
     0.457
SDI92467.1
Hypothetical protein.
  
     0.452
SDJ39750.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
  
     0.452
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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