STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88772.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (431 aa)    
Predicted Functional Partners:
SDI88737.1
Outer membrane protein.
 
  0.959
SDJ03457.1
Putative ABC transport system permease protein.
 
  
 0.871
SDI50776.1
Putative ABC transport system permease protein.
 
  
 0.870
SDJ75053.1
Putative ABC transport system ATP-binding protein.
 
 
 0.833
SDI92918.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
 0.712
SDI88803.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
       0.676
SDJ97069.1
Outer membrane efflux protein.
 
  0.615
SDJ61984.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
 0.594
SDI58452.1
Outer membrane protein TolC.
   
  0.545
SDI67276.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
   
  0.545
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.