STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI88984.1Histidine kinase. (360 aa)    
Predicted Functional Partners:
SDI88946.1
Two component transcriptional regulator, LytTR family.
 
  0.967
SDI78255.1
Two component transcriptional regulator, LytTR family.
 
  0.903
SDI62262.1
Two component transcriptional regulator, LytTR family.
 
  0.860
SDI66517.1
Two component transcriptional regulator, LytTR family.
 
  0.860
SDJ45254.1
Two component transcriptional regulator, LytTR family.
 
  0.860
SDJ90549.1
Two component transcriptional regulator, LytTR family.
 
  0.860
SDK08140.1
Two component transcriptional regulator, LytTR family.
  
  0.859
SDI95224.1
Two component transcriptional regulator, LytTR family.
  
  0.850
SDI89026.1
Protein of unknown function.
       0.773
SDI89063.1
Galactose oxidase, central domain.
 
     0.625
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.