STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI89742.1Glycosyl hydrolases family 43. (639 aa)    
Predicted Functional Partners:
SDI89694.1
Glycosyl hydrolases family 32 N-terminal domain-containing protein.
 
    
0.809
SDJ13050.1
alpha-N-arabinofuranosidase.
  
  
  0.673
xynD
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.641
SDJ95152.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.639
SDJ64668.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.630
SDI60875.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.601
SDI56879.1
Glycosyl hydrolases family 43.
  
  
 
0.563
SDI53552.1
Rhamnogalacturonan endolyase; Manually curated.
  
    0.561
SDI86615.1
Ig-like domain (group 4).
  
     0.542
SDJ33595.1
Glycosyl hydrolases family 43.
  
  
 
0.540
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.