STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI90242.1Cu2+-exporting ATPase. (843 aa)    
Predicted Functional Partners:
sodC
Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.983
SDI90152.1
Helix-turn-helix domain-containing protein.
  
 
 0.803
SDJ00563.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
 
 
 0.799
SDK05775.1
Cd2+/Zn2+-exporting ATPase.
 
 
0.707
SDI54357.1
Predicted transcriptional regulator.
  
  
 0.699
SDJ26746.1
Predicted transcriptional regulator.
  
  
 0.699
SDI89861.1
Copper chaperone CopZ.
  
 
 0.690
SDJ72446.1
Cu+-exporting ATPase.
 
 
0.685
cycA
Nitrite reductase (NO-forming).
  
 
 0.652
SDI90187.1
Hypothetical protein.
 
  
0.649
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.