STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI91396.1Protein of unknown function. (146 aa)    
Predicted Functional Partners:
SDJ65742.1
Hypothetical protein.
  
     0.709
SDI82034.1
uroporphyrinogen-III synthase.
  
     0.677
rpsU
SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.638
SDI83289.1
Protein of unknown function.
  
     0.634
tonB
Outer membrane transport energization protein TonB.
  
     0.588
SDI79475.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.583
SDI91364.1
SpoU rRNA Methylase family protein.
       0.542
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.516
SDJ01829.1
Putative sigma-54 modulation protein.
  
     0.505
sprA
Protein involved in gliding motility SprA.
  
     0.462
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.