STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI91951.1Uncharacterized Fe-S cluster protein YjdI. (77 aa)    
Predicted Functional Partners:
SDI92025.1
Hypothetical protein.
 
  
 0.959
SDI91986.1
Putative redox protein.
 
     0.849
SDI91912.1
NAD(P)H-dependent FMN reductase.
       0.810
SDI59915.1
Hypothetical protein.
  
  
 0.803
SDI92065.1
Hypothetical protein; Belongs to the pirin family.
       0.731
SDI91846.1
Signal transduction histidine kinase.
       0.489
SDI91879.1
Two component transcriptional regulator, winged helix family.
       0.489
SDI83403.1
RDD family protein.
  
     0.488
SDI92107.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.428
SDJ06451.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.421
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.