Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDI92467.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
SDI92499.1
Hypothetical protein.
       0.802
SDI64960.1
Starch-binding associating with outer membrane.
  
     0.685
SDI65001.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.672
SDI64303.1
Sugar phosphate isomerase/epimerase.
  
     0.591
SDI64256.1
Glycosyl hydrolase family 20, domain 2.
  
     0.542
SDI65363.1
alpha-L-rhamnosidase.
  
     0.531
SDI89026.1
Protein of unknown function.
  
     0.512
SDI64620.1
BNR repeat-like domain-containing protein.
  
     0.502
SDI64760.1
Putative collagen-binding domain of a collagenase.
  
     0.486
SDI92431.1
AraC-type DNA-binding protein.
       0.477
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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