STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI96957.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (328 aa)    
Predicted Functional Partners:
SDI96925.1
Alpha-1,2-mannosidase, putative.
     0.748
SDI96995.1
alpha-N-acetylglucosaminidase.
       0.682
SDI97041.1
Predicted acyltransferase.
       0.682
SDI97075.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.611
SDI96890.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
       0.490
SDI86615.1
Ig-like domain (group 4).
 
     0.487
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.479
SDJ12869.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.477
SDI64655.1
Glycosyl hydrolases family 32 N-terminal domain-containing protein.
 
     0.458
SDI89694.1
Glycosyl hydrolases family 32 N-terminal domain-containing protein.
 
     0.430
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.