STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI98446.1Starch-binding associating with outer membrane. (512 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.963
SDI98408.1
Iron complex outermembrane recepter protein.
 
     0.920
SDI79882.1
Iron complex outermembrane recepter protein.
  
     0.755
SDJ12794.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.749
SDI96678.1
Iron complex outermembrane recepter protein.
  
     0.729
SDJ75323.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.712
SDI87727.1
Iron complex outermembrane recepter protein; Manually curated.
  
     0.693
SDJ28665.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.693
SDJ58028.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.683
SDI51811.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.671
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.