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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI98522.1Pectinesterase. (329 aa)    
Predicted Functional Partners:
SDI98608.1
Pectinesterase.
  
  0.927
rhgT
Lysophospholipase L1.
     0.880
SDI57642.1
Pectinesterase.
 
  
  0.628
SDI53683.1
Pectinesterase.
 
  
  0.596
nuoF
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
  0.585
SDI57384.1
Pectinesterase.
 
  
  0.584
nuoE
NADH dehydrogenase subunit E.
    
  0.583
SDI97721.1
Pectinesterase.
 
  
  0.575
nuoG
NADH dehydrogenase subunit G.
    
  0.565
SDI98482.1
Pectinesterase.
 
  
 
0.560
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.