STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ00563.1Dissimilatory nitrite reductase (NO-forming), copper type apoprotein. (495 aa)    
Predicted Functional Partners:
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.999
norB
Nitric oxide reductase, NorB subunit apoprotein; Belongs to the heme-copper respiratory oxidase family.
 
 0.982
SDJ00760.1
MFS transporter, NNP family, nitrate/nitrite transporter.
    
 0.925
SDJ00302.1
Nitric oxide reductase, NorC subunit apoprotein.
 
 
  0.922
SDJ00653.1
Protein SCO1/2.
 
  
 0.921
SDJ95810.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.918
SDJ00628.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.905
nasC
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.903
SDJ11338.1
Nitrite reductase (NADH) large subunit.
     
 0.897
nirD-2
Nitrite reductase (NADH) small subunit.
    
  0.883
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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