STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ01540.1Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. (634 aa)    
Predicted Functional Partners:
SDJ04241.1
SPFH domain, Band 7 family protein.
  
  
 0.546
SDJ56548.1
Hypothetical protein.
  
     0.539
SDJ01583.1
Phage shock protein C (PspC) family protein.
  
    0.537
SDJ58462.1
AsmA protein.
  
    0.516
SDJ10083.1
Hypothetical protein.
  
     0.501
SDJ63305.1
Hypothetical protein.
  
     0.486
SDJ06547.1
Hypothetical protein.
  
    0.464
SDI82375.1
Catechol 2,3-dioxygenase.
  
    0.463
SDJ01502.1
phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.
  
    0.444
SDJ01431.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.431
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.