Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI51163.1 | SDI78180.1 | SAMN05192550_0090 | SAMN05192550_0795 | Competence protein ComEC. | comF family protein. | 0.875 |
SDI51163.1 | SDJ01661.1 | SAMN05192550_0090 | SAMN05192550_1418 | Competence protein ComEC. | DNA uptake protein ComE. | 0.681 |
SDI51163.1 | SDJ46694.1 | SAMN05192550_0090 | SAMN05192550_2173 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.773 |
SDI51163.1 | smf | SAMN05192550_0090 | SAMN05192550_0461 | Competence protein ComEC. | DNA processing protein. | 0.889 |
SDI78180.1 | SDI51163.1 | SAMN05192550_0795 | SAMN05192550_0090 | comF family protein. | Competence protein ComEC. | 0.875 |
SDI78180.1 | SDJ01661.1 | SAMN05192550_0795 | SAMN05192550_1418 | comF family protein. | DNA uptake protein ComE. | 0.569 |
SDI78180.1 | SDJ46694.1 | SAMN05192550_0795 | SAMN05192550_2173 | comF family protein. | Magnesium chelatase family protein. | 0.834 |
SDI78180.1 | smf | SAMN05192550_0795 | SAMN05192550_0461 | comF family protein. | DNA processing protein. | 0.917 |
SDJ01396.1 | SDJ01661.1 | SAMN05192550_1411 | SAMN05192550_1418 | Protein of unknown function. | DNA uptake protein ComE. | 0.535 |
SDJ01396.1 | smf | SAMN05192550_1411 | SAMN05192550_0461 | Protein of unknown function. | DNA processing protein. | 0.437 |
SDJ01622.1 | SDJ01661.1 | SAMN05192550_1417 | SAMN05192550_1418 | Amino acid/polyamine/organocation transporter, APC superfamily. | DNA uptake protein ComE. | 0.561 |
SDJ01622.1 | SDJ01701.1 | SAMN05192550_1417 | SAMN05192550_1419 | Amino acid/polyamine/organocation transporter, APC superfamily. | Hypothetical protein. | 0.598 |
SDJ01661.1 | SDI51163.1 | SAMN05192550_1418 | SAMN05192550_0090 | DNA uptake protein ComE. | Competence protein ComEC. | 0.681 |
SDJ01661.1 | SDI78180.1 | SAMN05192550_1418 | SAMN05192550_0795 | DNA uptake protein ComE. | comF family protein. | 0.569 |
SDJ01661.1 | SDJ01396.1 | SAMN05192550_1418 | SAMN05192550_1411 | DNA uptake protein ComE. | Protein of unknown function. | 0.535 |
SDJ01661.1 | SDJ01622.1 | SAMN05192550_1418 | SAMN05192550_1417 | DNA uptake protein ComE. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.561 |
SDJ01661.1 | SDJ01701.1 | SAMN05192550_1418 | SAMN05192550_1419 | DNA uptake protein ComE. | Hypothetical protein. | 0.757 |
SDJ01661.1 | SDJ04752.1 | SAMN05192550_1418 | SAMN05192550_1504 | DNA uptake protein ComE. | Tetratricopeptide repeat-containing protein. | 0.610 |
SDJ01661.1 | SDJ04785.1 | SAMN05192550_1418 | SAMN05192550_1505 | DNA uptake protein ComE. | Hypothetical protein. | 0.486 |
SDJ01661.1 | SDJ46694.1 | SAMN05192550_1418 | SAMN05192550_2173 | DNA uptake protein ComE. | Magnesium chelatase family protein. | 0.493 |
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