STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ03457.1Putative ABC transport system permease protein. (413 aa)    
Predicted Functional Partners:
SDJ75053.1
Putative ABC transport system ATP-binding protein.
 0.996
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 0.985
SDI88772.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.871
ftsE
Cell division transport system ATP-binding protein.
 
      0.802
cmpD
Bacitracin ABC transporter ATP-binding protein; Bicarbonate transport system ATP-binding protein/nitrate/nitrite transport system ATP-binding protein.
 
      0.603
SDI88737.1
Outer membrane protein.
 
   0.599
SDJ27741.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.569
SDJ64017.1
Heat shock protein Hsp15.
   
    0.533
SDJ57407.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
      0.521
hisS
histidyl-tRNA synthetase.
       0.491
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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