STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ04023.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
fabG
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
SDJ03963.1
Hypothetical protein.
       0.762
SDJ41814.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.644
SDJ07669.1
Hypothetical protein.
  
     0.577
SDI48194.1
Tetratricopeptide repeat-containing protein.
  
     0.556
SDJ04052.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.536
SDJ03897.1
CarboxypepD_reg-like domain-containing protein.
 
     0.493
SDJ46510.1
Hypothetical protein.
  
     0.482
SDI58452.1
Outer membrane protein TolC.
  
     0.479
SDJ83774.1
Protein of unknown function.
  
     0.452
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.