STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ04428.1Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (212 aa)    
Predicted Functional Partners:
SDJ90762.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
      0.768
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
      0.699
SDI65640.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.643
SDI78536.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.643
SDI81377.1
Thioredoxin.
   
 0.643
SDJ12246.1
Thioredoxin; Belongs to the thioredoxin family.
   
 0.643
SDJ45680.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.643
SDJ66340.1
AhpC/TSA family protein.
   
 0.643
fur
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
  
 0.601
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.598
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.