STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ07697.1Hypothetical protein. (233 aa)    
Predicted Functional Partners:
SDI74717.1
Hypothetical protein.
  
     0.703
SDJ40089.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.596
SDJ07762.1
Phosphomannomutase.
  
    0.560
msbA
ATP-binding cassette, subfamily B, MsbA.
       0.558
SDI55312.1
Hypothetical protein.
  
     0.555
SDI95147.1
Colicin import membrane protein.
  
     0.551
SDI70951.1
Outer membrane protein beta-barrel family protein.
  
     0.545
SDI48194.1
Tetratricopeptide repeat-containing protein.
  
     0.538
tonB
Outer membrane transport energization protein TonB.
  
     0.523
SDJ07669.1
Hypothetical protein.
  
     0.513
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.