STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ07831.1Protein of unknown function. (173 aa)    
Predicted Functional Partners:
SDJ07795.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.803
SDJ45532.1
Hypothetical protein.
  
     0.729
SDI55220.1
Lysylphosphatidylglycerol synthase TM region.
  
     0.705
SDI51476.1
Hypothetical protein.
  
     0.675
SDJ06599.1
HYR domain-containing protein.
  
     0.668
SDJ66853.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.643
SDI66226.1
Hypothetical protein.
  
     0.640
SDJ06779.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.626
SDI69930.1
Hypothetical protein.
  
     0.608
SDI88353.1
Protein involved in gliding motility RemB.
  
     0.586
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.