STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDJ10455.1Protein of unknown function. (122 aa)    
Predicted Functional Partners:
SDJ07091.1
Protein of unknown function.
  
     0.750
SDI82034.1
uroporphyrinogen-III synthase.
  
     0.685
SDI75908.1
Hypothetical protein.
  
     0.666
SDJ10493.1
ATP-binding cassette, subfamily B.
       0.656
SDJ63212.1
Acyl-CoA reductase (LuxC).
  
     0.643
SDI91078.1
GH3 auxin-responsive promoter.
  
     0.613
SDJ65742.1
Hypothetical protein.
 
    0.604
SDI79475.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.600
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
 
     0.548
SDJ73011.1
Protein of unknown function.
  
     0.539
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.