close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ11903.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (472 aa)    
Predicted Functional Partners:
SDJ11866.1
Prolyl oligopeptidase family protein.
 
     0.799
SDJ11934.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
       0.773
SDJ42417.1
Glycosyl hydrolases family 35.
  
     0.607
SDI89694.1
Glycosyl hydrolases family 32 N-terminal domain-containing protein.
  
     0.585
SDJ28510.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
     0.519
SDI60644.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.502
SDI51719.1
Carbohydrate binding domain-containing protein.
  
  
  0.494
SDJ58511.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.481
SDJ28437.1
Alginate lyase.
  
     0.472
SDI98058.1
Protein of unknown function.
  
     0.461
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.