STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ11934.1Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (460 aa)    
Predicted Functional Partners:
SDI97754.1
Pectinesterase.
 
   0.830
SDJ11866.1
Prolyl oligopeptidase family protein.
 
     0.806
SDI97661.1
Unsaturated rhamnogalacturonyl hydrolase.
 
     0.774
SDJ11903.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
       0.773
SDI97633.1
Unsaturated rhamnogalacturonyl hydrolase.
 
     0.770
SDI57193.1
Unsaturated rhamnogalacturonyl hydrolase.
 
     0.765
SDI53863.1
Lysophospholipase L1.
 
 
   0.761
SDJ42139.1
Lysophospholipase L1.
 
 
   0.753
rhgT
Lysophospholipase L1.
 
   0.732
SDI57642.1
Pectinesterase.
 
  
  0.698
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.