STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ11966.1PAS domain S-box-containing protein. (1119 aa)    
Predicted Functional Partners:
SDI48782.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.999
SDI57117.1
Two component regulator propeller.
 
0.999
SDI61110.1
Signal transduction histidine kinase.
 
0.999
SDI74682.1
Signal transduction histidine kinase.
 
0.999
SDI75168.1
Signal transduction histidine kinase.
 
0.999
SDI78698.1
PAS domain S-box-containing protein.
 0.999
SDI80141.1
Signal transduction histidine kinase.
 
0.999
SDI89657.1
Response regulator receiver domain-containing protein.
 
0.999
SDI94336.1
AraC family transcriptional regulator; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
0.999
SDI94629.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
0.999
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.