STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBCytochrome bd-I ubiquinol oxidase subunit 2 apoprotein. (358 aa)    
Predicted Functional Partners:
SDJ12403.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
 0.999
SDJ12502.1
Plasmid stabilization system protein ParE.
 
     0.644
sdhA
Succinate dehydrogenase subunit A.
     
 0.612
SDJ95849.1
Rubredoxin.
 
  
 0.580
SDJ12371.1
Glyoxylase, beta-lactamase superfamily II.
       0.558
SDJ12471.1
Hypothetical protein.
       0.558
sdhC
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
     
  0.499
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
     
 0.419
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.