STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ27415.1Protein of unknown function. (376 aa)    
Predicted Functional Partners:
SDJ26985.1
Rhamnogalacturonyl hydrolase YesR.
 
     0.726
SDJ28034.1
Unsaturated chondroitin disaccharide hydrolase.
 
     0.685
SDJ27378.1
Signal transduction histidine kinase.
       0.675
SDI61044.1
Rhamnogalacturonyl hydrolase YesR.
 
     0.665
SDJ27301.1
Arylsulfatase A.
 
  
  0.502
SDI54186.1
Rhamnogalacturonyl hydrolase YesR.
 
      0.488
kduI2
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
    0.477
SDJ64134.1
Protein of unknown function.
  
     0.457
SDJ27340.1
Heparinase II/III-like protein.
  
    0.438
SDI84466.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
  
  
  0.406
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.